Articles
A COST-EFFECTIVE STRATEGY FOR MARKER ASSISTED SELECTION (MAS) IN APPLE (M. PUMILA MILL.): THE EXPERIENCE FROM THE FONDAZIONE EDMUND MACH PROGRAMME FOR RESISTANCE AND QUALITY TRAITS
Article number
1100_10
Pages
85 – 89
Language
English
Abstract
Marker assisted selection (MAS) permits the selection of plants carrying genes
that control interesting agronomic traits through the screening of associated markers;
this allows the breeders to retain only germplasm conferring desirable traits from an
early stage.
Usually MAS involves the screening of hundreds or thousands of seedlings
and thus the main challenge faced is the development of a pipeline that starts with a
lab friendly and unambiguous seedling disposition in greenhouse, allows the rapid
collection of samples avoiding cross contamination, implements a fast, cost-effective,
high-throughput method of DNA extraction to be used for a small number of PCRs, and
utilizes robust, reliable, and easy to interpret molecular markers.
In this study ~6,500
seedlings from 24 apple crosses were genotyped in order to select seedlings conferring
resistance traits, fruit quality traits or both.
Lab work was performed using the KAPA
3G Plant PCR kit.
The main problems encountered were associated with dirty extractions;
however, following optimization less than 10% of the seedlings had to be resampled
and in total about 70% of the samples tested carried desirable traits.
that control interesting agronomic traits through the screening of associated markers;
this allows the breeders to retain only germplasm conferring desirable traits from an
early stage.
Usually MAS involves the screening of hundreds or thousands of seedlings
and thus the main challenge faced is the development of a pipeline that starts with a
lab friendly and unambiguous seedling disposition in greenhouse, allows the rapid
collection of samples avoiding cross contamination, implements a fast, cost-effective,
high-throughput method of DNA extraction to be used for a small number of PCRs, and
utilizes robust, reliable, and easy to interpret molecular markers.
In this study ~6,500
seedlings from 24 apple crosses were genotyped in order to select seedlings conferring
resistance traits, fruit quality traits or both.
Lab work was performed using the KAPA
3G Plant PCR kit.
The main problems encountered were associated with dirty extractions;
however, following optimization less than 10% of the seedlings had to be resampled
and in total about 70% of the samples tested carried desirable traits.
Authors
E. Banchi, L. Poles, P. Magnago, M. Pindo, F. Costa, R. Velasco, D.J. Sargent
Keywords
breeding, SCAR, SSR, ASO, apple scab, powdery mildew, fruit texture, KAPA 3G
Online Articles (27)