Articles

USE OF A REFERENCE OCTOPLOID MAP FOR DETECTING HOMOEOLOGOUS QTLS POTENTIALLY INVOLVED IN VIABILITY IN THE CULTIVATED STRAWBERRY

Article number
842_112
Pages
537 – 540
Language
English
Abstract
The construction of a reference map of the complex octoploid cultivated strawberry was optimized by comparative mapping between Fragaria showing different levels of ploidy.
In addition, this approach is a powerful tool for improving the detection of QTLs, and for a better understanding of the organization of these QTLs.
By identifying the homoeologous linkage groups in the complex octoploid cultivated strawberry, potential homoeologous QTLs in Fragaria can be detected.
The comparative mapping was based on two populations belonging to two different levels of Fragaria. The linkage map of the complex octoploid cultivated strawberry (Fragaria × ananassa Duch., 2n=8x=56) was based on a segregating population of 213 individuals of a cross between ‘Capitola’ and ‘CF1116’, two genotypes with many contrasting traits.
This genetic map was compared to the diploid one, obtained from an interspecific cross between F. vesca and F. bucharica (Sargent et al., 2006). Based on 56 SSR markers common to both diploid and octoploid genetic maps, almost all linkage groups of the genetic octoploid map were arranged into the seven homoeologous groups (HGs) expected for the genus Fragaria, which belongs to the tribe Rosoideae.
For each trait, QTLs can potentially be detected on each linkage group belonging to the same HG. Results showed detection of homoeologous chromosomal regions potentially involved in viability of the plant.

Publication
Authors
B. Denoyes-Rothan, M. Rousseau-Gueutin, A. Gaston, D. Roca, N. Pedeprat, E. Lerceteau-Köhler, L. Barrot, A. Petit, P. Chartier
Keywords
polyploidy, Fragaria, comparative genetic mapping, QTL
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P. Tongtraibhop | T. Thongthieng | C. Nuengchaknin | C. Pitakpittaya
T. Mochizuki | Y. Yoshida | T. Yanagi | M. Okimura | A. Yamasaki | H. Takahashi
L.M.F. Castañeda | L.E.C. Antunes | N.C. Ristow | S. Carpenedo
Jong-Bun Seo | Gil-Ho Shin | Kyung-Chul Cho | Joung-Keun Kim | Kyong-Ju Choi | Won-Mo Yang
A. Domínguez | E. Martínez | A. Trigo | D. Alonso | R. García | R. Sánchez | R. Ghorbel | J. Tomás
G. Caracciolo | A. Moncada | C. Prinzivalli | F. D'Anna
C. Reisser Júnior | J.C. Carvalho | L.M.F. Castañeda | N.C. Ristow | S. Carpenedo | L.E. Corrêa Antunes
S.K. Kim | H.Y. Na | J.H. Song | M.J. Kim | J.E. Son | R.N. Bae | C. Chun | H.J. Kang
Zhihong Zhang | Linlin Chang | Hongyi Yang | Min Xiao | He Li | Hongyan Dai
O. Daugovish | M. Mochizuki | S. Fennimore
C. Redondo | A. De Cal | A. Martínez-Treceño | M. Becerril | J.M. López-Aranda | P. Melgarejo
C. Redondo | A. De Cal | A. Martínez-Treceño | E. García | D. García-Sinovas | M. Becerril | J.M. López-Aranda | P. Melgarejo
K. Olbricht | G. Staudt | P. Becker | I. Szankowski
F.T. Arroyo | B. De los Santos | F. Romero | J. Moreno | P. Daza | J. Torreblanca
L. Antoniacci | E. De Paoli | C. Montuschi | G. Ceredi | S. Gengotti
B. De los Santos | C. Blanco | F.T. Arroyo | Y. Llergo | F. Romero | C. Soria | J.F. Sánchez-Sevilla | J.M. López-Aranda
J. Cubero | M.A. Ayllón | I. Gell | P. Melgarejo | A. De Cal | P.M. Martín-Sánchez | R.M. Pérez-Jiménez | C. Soria | E. Segundo | I. Larena
A. Aguado | B. De los Santos | F.T. Arroyo | Y. Llergo | C. Blanco | J. Ortega | F. Romero
A. Sombardier | L. Willocquet | D. Blancard | M.F. Corio-Costet | S. Savary | A. Bardet | C. Eckert | Y. Trottin-Caudal | B. Denoyes-Rothan | J.J. Pommier | A. Petit | P. Chartier
N.C. Ristow | S. Carpenedo | R. Trevisan | L.E.C. Antunes | C.J. da Silva Freire
M. Avilés | S. Castillo | C. Borrero | M.L. Castillo | T. Zea-Bonilla | R.M. Pérez-Jiménez
M. Abril | K.J. Curry | A.J. DeLucca | S. Boue | B.J. Smith | D.E. Wedge
M. Mari | S. Gengotti | G. Ceredi | L. Antoniacci | C. Montuschi | E. De Paoli
V.C. Conci | A.K. Torrico | E. Cafrune | V. Quevedo | O. Baino | J.C. Ramallo | A.M. Borquez | V.A. Mollinedo | J.J. Agüero | D.S. Kirschbaum
M. Ragab | K. El-Dougdoug | S. Mousa | A. Attia | I. Sobolev | S. Spiegel | S. Freeman | M. Zeidan | I.E. Tzanetakis | R.R. Martin
R.M. Pérez-Jiménez | E. Segundo | M.P. Carmona | A. González-Vizcaíno | J. Gálvez Farfán | T. Zea-Bonilla | P.M. Martín-Sánchez | I. Amaya | C. Soria | J.M. López-Aranda | J.F. Sánchez-Sevilla
G. Ceredi | L. Antoniacci | C. Montuschi | E. De Paoli | M. Mari | S. Gengotti
T. Kanto | K. Matsuura | M. Yamada | T. Usami | Y. Amemiya
J. Soliveri | M. Arenas | J.L. Copa-Patiño | J.L. Caballero | J. Muñoz-Blanco
P. Parikka | P. Kivijärvi | S. Prokkola | R. Kemppainen
M. Gaskell | M.P. Bolda | J. Muramoto | O. Daugovish
J.C. Shih | T.F. Hsieh | C.C. Ho
Qing-Hua Gao | Zheng-wen Ye | Hong-qing Zheng | Xue-ying Zhang
Li Yang | Li Li | Lei Yang | Baochun Hao | Fengjie Chu
E. Vicente | G. Giménez | A. Manzzioni | F. Vilaró | M. González | M. Cabot
T. Yanagi | P. Nathewet | N. Okuda | K. Sone
P.A. Dávalos-González | J. Narro-Sánchez | A.E. Jofre-Garfias | A.R. Hernández Razo | M.N. Vázquez-Sánchez
A. Refoyo | J.M. Arenas | S. Castillo | M. Avilés
K. Sone | M. Okimura | E. Kitadani | T. Mochizuki | Y. Noguchi | H. Yoshida
E. Montironi | E. Costantini | B. Mezzetti | F. Mourgues | C. Rosati
F. Capocasa | J. Diamanti | S. Pierini | B. Mezzetti
H. Takahashi | A. Yamasaki | K. Shoji | K. Kawagishi | T. Taguchi | Y. Yoshida | M. Morishita
G. Staudt | S. Schneider | P. Scheewe | D. Ulrich | K. Olbricht
M.E. Herrington | L. Woolcock | M. Wegener | M. Dieters | J. Moisander
C. Soria | J.J. Medina | J.F. Sánchez-Sevilla | R. Bartual | A. Refoyo | J. Gálvez | L. Miranda | R. Villalba | M.T. Ariza | J.M. López-Aranda
M.D. Vitten | K. Olbricht | F. Tiedke
M. Alsheikh | R. Sween | A. Nes | M. Gullord
N.C. Ristow | S. Carpenedo | C. Reisser Junior | A.C. Richter Krolow | J.E. Schwengber | L.E.C. Antunes
D.W. Simpson | K.J. Hammond | A.W. Johnson | A.J. Passey | A.B. Whitehouse
T.M. Davis | M.E. Shields | Qian Zhang | E.G. Poulsen | J.L. Bennetzen | K.M. Folta | P. San Miguel
B. Denoyes-Rothan | M. Rousseau-Gueutin | A. Gaston | D. Roca | N. Pedeprat | E. Lerceteau-Köhler | L. Barrot | A. Petit | P. Chartier
A. Moncada | G. Caracciolo | C. Prinzivalli | F. D'Anna
W. Faedi | L. Ballini | G. Baroni | G. Baruzzi | M. Baudino | R. Giordano | P. Lucchi | M.L. Maltoni | M. Migani | L. Placchi
W. Faedi | G. Baruzzi | G. Capriolo | F. D'Anna | P. Lucchi | A. Marano | G. Martelli | C. Mennone | C. Prinzivalli
G. Baruzzi | W. Faedi | P. Lucchi | M. Migani | P. Sbrighi | P. Turci
J.A. García-Gago | J.M. López-Aranda | J. Muñoz-Blanco | F.J. Toro | M.A. Quesada | F. Pliego-Alfaro | J.A. Mercado
W. Njuguna | N.V. Bassil | K.E. Hummer | C. Richards | T.M. Davis
Zhao Mizhen | Wu Weimin | Lei Jiajun | Qian Yaming | Wang Zhuangwei | Yuan Ji
Wu Weimin | Zhao Mizhen | Wang Zhuangwei | Qian Yaming | Yuan Ji
M. Nikolić | J. Milivojević | M. Ivanović
Shuping Yin | K.D. Larson
Jeng-Hsien Tsai | Gwang-Miao Chang | Tian-Yih Wu | Shu-Chen Peng | Hsun-Yao Chang | Su-Jein Chang
B. Mezzetti | R. Nestby | M. Korbin | B. Denoyes-Rothan | B. van Duijn | M. Bodson
M. Turquet | J.J. Pommier | M. Piron | E. Lascaux | G. Lorin
T. Tuovinen | I. Lindqvist | S. Kauppinen | P. Kivijärvi
T. Ikeda | K. Yamazaki | H. Kumakura | H. Hamamoto
D. García-Sinovas | E. García-Méndez | M.A. Andrade | A. de Cal | P. Melgarejo | T. Salto | M.L. Martínez-Beringola | C. Redondo | A. Martínez-Treceño | M. Becerril | J.J. Medina | C. Soria | J.M. López-Aranda
E. García-Méndez | D. García-Sinovas | M.A. Andrade | B. González | J.F. Sánchez-Sevilla | J.M. López-Aranda | J.J. Medina | L. Miranda
A. Martínez-Treceño | P. Chomé | M. Becerril | C. Soria | J.J. Medina | J.M. López-Aranda
F. D'Anna | A. Moncada | G. Caracciolo | L. Guarino | A. Virzì | P. Spata
E.Z. Brandán | R.R. Fernández | E.L. Villagra | S.M. Salazar | C. Cruz | R. Ponce de León
M.S.S. El-Shabasi | M.E. Ragab | I.I. El-Oksh | Y.M.M. Osman
L. Landi | E. Costantini | E. Montironi | B. Mezzetti
M.T. Ariza | J.M. López-Aranda | M.T. Cid-Atencia | C. Soria | J.J. Medina | L. Miranda
A.W. Johnson | O.M. Grant | M.J. Davies | C.M. James | A.J. Passey | D.W. Simpson
J. Rohloff | A.M. Bones | P. Winge | T.S. Jørstad | J. Kopka | A. Erban | A.M. Bones | T. Sparstad | R.C. Wilson | S.K. Randall | J. Davik | M. Alsheikh
V. Luko¿evičiūtė | R. Rugienius | I. Zalunskaite | A. Sasnauskas | V. Stanys
Y.T. Zhang | J. Kong | T.Z. Li | Z.H. Han | G.X. Wang | J. Dong | C.F. Zhong
G. Sarli | A. De Lisi | V. Montesano | D. Schiavone
A. Bolognesi | G. Baruzzi | A. Chatgilialoglu | M. Bortolotti | L. Polito | W. Faedi
R.F.F. Cantillano | L.E.C. Antunes | L.M. Castañeda | R.O. Treptow
N. Tsukamoto | K. Fukuhara | X.X. Li | S. Yamashita | S. Yui | Y. Inaba | M. Okimura | H. Ikeura | Y. Hayata
H. Ikeura | N. Tsukamoto | K. Fukuhara | X.X. Li | S. Yamashita | S. Yui | Y. Inaba | M. Okimura | M. Tamaki | Y. Hayata
J.M. Silva | L.C.S.A. Correia | N.P. Moura | P.L. Salgado | M.I.S. Maciel | H.P. Villar
M.B. Sousa | T. Curado | M.J. Trigo | F.N. Vasconcelos | T. Nunes
C.R. Figueroa | R. Herrera | P. Pimentel | P.D.S. Caligari | M.A. Moya-León
X.X. Li | N. Tsukamoto | K. Fukuhara | S. Yamashita | T. Sakamoto | M. Okimura | Y. Hayata
J.G. Pádua | J. Duarte Filho | C.M. Caproni | R.V. da Mota | L.E.C. Antunes | E.L. do Carmo
E. Kafkas | N. Kemal Koc | S. Paydas Kargı | M.A. Unlü | K. Erçik | A. Kiminsu
M.A. Quesada | S. Posé | N. Santiago-Doménech | R. Sesmero | M.C. Molina | S. Mousa | F. Pliego-Alfaro | J.A. Mercado | J.L. Caballero | J. Muñoz-Blanco | L. Trainotti | G. Casadoro | J.A. García-Gago | J.M. López-Aranda
A.M. León | P. Torres | C. Sanz | A.G. Pérez
S. Voća | B. Duralija | J. Dru¿ić | N. Dobričević | V. Dragović-Uzelac
I. Williams | J.C. Williams | L. Hernández | G. Maya
M.G. Palha | J.L. Campo | L. Reis | T. Curado | M.B. Sousa | C.S. Andrade
J.J. Heller | PH. Sunder | P. Charles | J.J. Pommier | J. Fritsch
J.M. López-Aranda | L. Miranda | C. Soria | R.M. Pérez-Jiménez | T. Zea | M. Talavera | F. Romero | B. De Los Santos | J.M. Vega | J.I. Páez | J. Bascón | F.J. Domínguez | P. Palencia | J.J. Medina
E. García-Méndez | D. García-Sinovas | M.A. Andrade | A. De Cal | P. Melgarejo | T. Salto | M.L. Martínez-Beringola | C. Redondo | A. Martínez-Treceño | M. Becerril | J.J. Medina | C. Soria | J.M. López-Aranda
M.G. Palha | J.L. Campo | T. Curado | M.B. Sousa | P.B. Oliveira
H.S. Yoon | Y.H. Hwang | C.G. An | J.S. Shim | H.J. Hwang | H.Y. Shin
S. López-Galarza | A. San Bautista | A. Martínez | B. Pascual | J.V. Maroto