Articles
Unraveling Psa resistance in kiwifruit: insights from A. chinensis and A. arguta gene expression
Article number
1454_23
Pages
165 – 172
Language
English
Abstract
Kiwifruit (Actinidia spp.) cultivation has been severely impacted by bacterial canker caused by Pseudomonas syringae pv. actinidiae (Psa), especially in susceptible species like A. chinensis. This study investigates the molecular responses to Psa infection in two genotypes, the susceptible ‘Soreli’ (A. chinensis var. chinensis) and potentially resistant ‘Cornell’ (A. arguta). Canes were inoculated with Psa and kept under controlled conditions for six weeks, with disease severity assessed through lesion length and infection percentage.
RNA sequencing (RNA-seq) was performed on sub-cortical tissues to identify differentially expressed genes (DEGs) linked to resistance and susceptibility.
Module-specific analyses revealed that Modules 1 and 2 were enriched for DEGs distinguishing the two genotypes, possibly reflecting intrinsic genetic differences.
Module 3, however, was enriched for DEGs in both genotypes under Psa infection, indicating its involvement in the plant’s response to the bacteria.
QTL analysis identified three QTLs associated with resistance in A. arguta and one linked to susceptibility in A. chinensis. Notably, QTLs on chromosomes 4, 17, and 28 were associated with resistance mechanisms, while a QTL on chromosome 9 was linked to susceptibility, involving genes related to redox signaling and cuticular wax biosynthesis.
These findings provide valuable insights into the genetic basis of Psa resistance and susceptibility in kiwifruit, offering potential targets for future breeding efforts.
RNA sequencing (RNA-seq) was performed on sub-cortical tissues to identify differentially expressed genes (DEGs) linked to resistance and susceptibility.
Module-specific analyses revealed that Modules 1 and 2 were enriched for DEGs distinguishing the two genotypes, possibly reflecting intrinsic genetic differences.
Module 3, however, was enriched for DEGs in both genotypes under Psa infection, indicating its involvement in the plant’s response to the bacteria.
QTL analysis identified three QTLs associated with resistance in A. arguta and one linked to susceptibility in A. chinensis. Notably, QTLs on chromosomes 4, 17, and 28 were associated with resistance mechanisms, while a QTL on chromosome 9 was linked to susceptibility, involving genes related to redox signaling and cuticular wax biosynthesis.
These findings provide valuable insights into the genetic basis of Psa resistance and susceptibility in kiwifruit, offering potential targets for future breeding efforts.
Authors
G. De Mori, F. Marroni, G. Cipriani
Keywords
Actinidia spp., bacterial canker, RNA-seq, disease management
Groups involved
- Division Plant Genetic Resources, Breeding and Biotechnology
- Working Group Genetic Transformation and Gene Editing
- Working Group Horticultural Biotechnology and Breeding
- Division Ornamental Plants
- Division Vegetables, Roots and Tubers
- Division Temperate Tree Fruits
- Division Vine and Berry Fruits
- Division Horticulture for Development
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