Home > IV Asian Horticultural Congress – AHC2023 > Transcriptome analysis for ‘Ruby-Roman’ grapes grafted on diploid and tetraploid rootstocks

Articles

Transcriptome analysis for ‘Ruby-Roman’ grapes grafted on diploid and tetraploid rootstocks

Article number

1404_111

Pages

817 – 826

Language

English

Abstract

In order to explore the influence of rootstock on grape berry maturation, we investigated anthocyanin, sugar, and endogenous hormone contents in the berry skin during the ripening of ‘Ruby Roman’ grafted on the rootstocks of ‘Kober 5BB’ [5BB(2x), a semidwarf rootstock], ‘Hybrid Franc’ [HF(2x), a vigorous rootstock], and their colchicine-induced autotetraploids rootstocks [5BB(4x) and HF(4x)] in our previous study.
The berries on the 5BB(4x) rootstock exhibited higher anthocyanin content during the ripening process and showed a tendency to possess elevated levels of endogenous hormone contents including abscisic acid (ABA), indole acetic acid (IAA), and cytokinins around véraison.
To gain insights into the transcriptional profiles of the berries grafted on the different rootstocks, a mRNA-Seq analysis was conducted using the Illumina HiSeq 4000 system.
Many genes in anthocyanin biosynthesis and transport pathway such as VviUFGT, VviFAOMT, F3ʹ5ʹH, F3H, AM2, 3AT, GST4 were upregulated at DAF59 (59 day after full-bloom) compared with DAF48 (véraison). Notably, the expression levels of these genes were higher in the 5BB(4x) berries than in the others.
Three MYB transcription factor families, namely VviMYBA2, VviMYBA8 and VviMYB15 had higher expression levels in 5BB(4x) at DAF59. Some ABA metabolism and transport-related genes including VviNCED6, VviCCD4b, AAO3, two ABC transporter superfamily (VIT_209s002 g05590, VIT_209s002 g05570), VviABAGT and VviABABG1 were upregulated at DAF59 compared to DAF48. VviNCED3, considered to be a key gene in ABA biosynthetic pathway, had higher expression level in 5BB(4x) at DAF48. The results suggest that ABA biosynthesis was accelerated immediately after véraison.
These results could provide valuable information for elucidating the mechanism of grape berry maturation.

Publication

IV Asian Horticultural Congress – AHC2023

Authors

M. Gao-Takai, T.S. Li, Z. Lin, T. Segawa, H. Takagi, A. Katayama-Ikegami

Keywords

abscisic acid, anthocyanin, grape berry ripening, gene expression, RNA-Seq

Full text

https://doi.org/10.17660/ActaHortic.2024.1404.111

Groups involved

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P.A. Casquero | A. Porteous | C. Domínguez | A. Rodríguez-González | S. Mayo-Prieto

181. Effects of rain-protected culture in a plastic greenhouse using the whole harvest cultivation method for one-year-old asparagus plants

S. Yamashita | K. Seimiya | K. Yamafuji | T. Taguchi | S. Motoki

182. Estimation of the light extinction coefficients of lateral asparagus ferns using a numerical method

T. Kuroyanagi | H. Yoshikoshi | M. Hikawa-Endo

183. Glycine betaine material affects the growth and yield of asparagus in the long-term harvest production system in a semi-forcing culture

F. Satake | K. Okada | Y. Yoshida | W. Sakata | S. Motoki

184. Mounding increases the rate of thick spears of asparagus

K. Suzuki | Y. Ayabe | A. Kato | S. Motoki

185. Investigation of nutrient solution management in hydroponics using organic fertilizer

T. Endoh | M. Takagaki | P. Suwitchyanon | C. Chaturong

186. Effect of different cultivation methods and environments on the growth and yield of Shimonita-Negi

M. Okabe | K. Obokata | T. Hirose | Y. Hashida

187. Predicting corn salad (Valerianella spp.) weight in a plant factory with artificial lighting (PFAL) using K-Nearest Neighbors algorithm (KNN)

S. Dhammayorddee | C. Chanseetis | A. Kato | M. Takagaki | N. Lookin

188. The effect of water and fertilizer types on growth and yield of supan-supan (Neptunia oleracea) cultivated on flooded Ultisol media

H. Susanti | J. Purnomo | O.A. Kumadawara

189. Effect of low sunlight and high temperature during flower bud differentiation on the cut flower quality of carnation ‘Cherry Tessino’

S. Kamachi | R. Sakai | S. Nagashima | S. Mori

190. Deficit irrigation and fertilizer rates affecting growth, flower quality and physiological changes in tuberous begonia grown in plant factory

C. Inkham | K. Panjama | S. Ruamrungsri

191. Growth and flowering characteristics of Calendula under different light spectra in a controlled environment

M. Munyanont | N. Lu | T. Joilek | D.F. Rachma | M. Takagaki

192. Selection of optimal marigold (Tagetes patula) cultivar as an edible flower in a plant factory

N.Y. Kwak | B.H. Sung | K.P.S. Kumaratenna | Y.Y. Cho

193. Promoting flower yields, photosynthetic pigments and some secondary metabolite in Marguerite daisy (Chrysanthemum frutescens L.) cut flower under the smart farming system by pinching technique

Y. Luekhampa | C. Seelatlao | W. Chareontham | J. Sanitchon | P. Hongpakdee

194. Nutrient deficiencies affect growth and development of vinca

S. Ruamrungsri | C. Inkham | K. Panjama

195. Relationship between Asian ginseng decline and soil chemical property

Md.A.A. Mahmud | Y. Matsubara | T. Ikezawa

196. Influence of different flower vases on the impression of cut flowers

Y. Mitarai

197. Effects of different LED light spectrum on growth and cannabinoid contents of Cannabis sativa L. hybrid ‘KKU’ cultivars under an indoor pot cultivation

P. Nounbunma | P. Hongpakdee | J. Paluka | C. Lapjit

198. Effects of cultivation environmental factors on the growth of the edible cactus (Nopalea cochenillifera) grown under hydroponic conditions

S. Tsuchimoto | K. Okada | K. Kondo | T. Horibe

199. Calcium and magnesium biofortification of the edible cactus Nopalea cochenillifera grown under hydroponic conditions

E. Nishimura | K. Hayashi | T. Horibe

200. Effect of selling area, period, and type on the price of okra (Abelmoschus esculentus L.) in Japan

L. Sato | N. Miyamoto | S. Motoki

201. Comparative analysis of asparagus marketing practices in Europe, North America, and Asia during summer and autumn

S. Yamashita | S. Motoki

202. Edible alleys in the discourse of urban horticulture: a case study on densely built urban renewal districts in Chiayi, Taiwan

T.I. Lee

203. Application of calcium chloride on yield and quality of Capsicum annuum L.

N. Montri | S. Sengseng | R. Deewatthanawong | K. Bunya-atichart

204. Development of a growth state estimation system using a moving camera in strawberry cultivation

S. Matsuo | H. Umeda

205. The impact of adding nanoparticles to the media to speed up the in vitro multiplication stage of banana explants

P. Nugrahani | I.R. Moeljani